Total: 23 publication(s)


Manigrasso J, Chillón I, Genna V, Vidossich P, Somarowthu S, Pyle AM, De Vivo M, Marcia M. (2020)

Visualizing group II intron dynamics between the first and second steps of splicing.

Nat Commun 11(1) doi: 10.1038/s41467-020-16741-4
Europe PMC | doi

Uroda T, Chillon I, Annibale P, Teulon JM, Pessey O, Karuppasamy M, Pellequer JL, Marcia M. (2020)

Visualizing the functional 3D shape and topography of long noncoding RNAs by single-particle atomic force microscopy and in-solution hydrodynamic techniques.

Nat Protoc 15(6):2107-2139. doi: 10.1038/s41596-020-0323-7
Europe PMC | doi


Uroda T, Anastasakou E, Rossi A, Teulon JM, Pellequer JL, Annibale P, Pessey O, Inga A, Chillón I, Marcia M. (2019)

Conserved pseudoknots in incRNA MEG3 are essential for stimulation of the p53 pathway.

Mol. Cell 75(5):982-995.e9. doi: 10.1016/j.molcel.2019.07.025
Europe PMC | doi

Genna V, Marcia M, Vivo M. (2019)

A transient and flexible cation-π interaction promotes hydrolysis of nucleic acids in DNA and RNA nucleases.

J. Am. Chem. Soc. 141(27) doi: 10.1021/jacs.9b03663
Europe PMC | doi

García-Rodríguez FM, Neira JL, Marcia M, Molina-Sánchez MD, Toro N. (2019)

A group II intron-encoded protein interacts with the cellular replicative machinery through the β-sliding clamp.

Nucleic Acids Res. 47(14) doi: 10.1093/nar/gkz468
Europe PMC | doi

Colombo M, Pessey O, Marcia M. (2019)

Topology and enzymatic properties of a canonical Polycomb repressive complex 1 isoform.

FEBS Lett. 593(14):1837-1848. doi: 10.1002/1873-3468.13442
Europe PMC | doi


Genna V, Colombo M, De Vivo M, Marcia M. (2018)

Second-Shell Basic Residues Expand the Two-Metal-Ion Architecture of DNA and RNA Processing Enzymes.

Structure 26(1):40-50. doi: 10.1016/j.str.2017.11.008
Europe PMC | doi


Li YE, Xiao M, Shi B, Yang YT, Wang D, Wang F, Marcia M, Lu ZJ. (2017)

Identification of high-confidence RNA regulatory elements by combinatorial classification of RNA-protein binding sites.

Genome Biol. 18(1) doi: 10.1186/s13059-017-1298-8
Europe PMC | doi


Marcia M. (2016)

Using Molecular Replacement Phasing to Study the Structure and Function of RNA.

Methods Mol Biol 1320:233-57. doi: 10.1007/978-1-4939-2763-0_15
Europe PMC | doi


Chillón I, Marcia M, Legiewicz M, Liu F, Somarowthu S, Pyle AM. (2015)

Native Purification and Analysis of Long RNAs.

Methods Enzymol 558:3-37. doi: 10.1016/bs.mie.2015.01.008
Europe PMC | doi

Zhao C, Rajashankar KR, Marcia M, Pyle AM. (2015)

Crystal structure of group II intron domain 1 reveals a template for RNA assembly.

Nat. Chem. Biol. 11(12):967-972. doi: 10.1038/nchembio.1949
Europe PMC | doi

Somarowthu S, Legiewicz M, Chillón I, Marcia M, Liu F, Pyle AM. (2015)

HOTAIR forms an intricate and modular secondary structure.

Mol. Cell 58(2):353-361. doi: 10.1016/j.molcel.2015.03.006
Europe PMC | doi


Marcia M, Pyle AM. (2014)

Principles of ion recognition in RNA: insights from the group II intron structures

RNA 20(4):516-527. doi: 10.1261/rna.043414.113
Europe PMC | doi

Zhang C, Allegretti M, Vonck J, Langer JD, Marcia M, Peng G, Michel H. (2014)

Production of fully assembled and active Aquifex aeolicus F1FO ATP synthase in Escherichia coli

Biochim. Biophys. Acta 1840(1):34-40. doi: 10.1016/j.bbagen.2013.08.023
Europe PMC | doi


Marcia M, Humphris-Narayanan E, Keating KS, Somarowthu S, Rajashankar K, Pyle AM. (2013)

Solving nucleic acid structures by molecular replacement: examples from group II intron studies

Acta Crystallogr. D Biol. Crystallogr. 69(Pt 11):2174-2185. doi: 10.1107/s0907444913013218
Europe PMC | doi

Zhang C, Marcia M, Langer JD, Peng G, Michel H. (2013)

Role of the N-terminal signal peptide in the membrane insertion of Aquifex aeolicus F1F0 ATP synthase c-subunit

FEBS J. 280(14):3425-3435. doi: 10.1111/febs.12336
Europe PMC | doi

Marcia M, Somarowthu S, Pyle AM. (2013)

Now on display: a gallery of group II intron structures at different stages of catalysis

Mob DNA 4(1) doi: 10.1186/1759-8753-4-14
Europe PMC | doi


Marcia M, Pyle AM. (2012)

Visualizing group II intron catalysis through the stages of splicing

Cell 151(3):497-507. doi: 10.1016/j.cell.2012.09.033
Europe PMC | doi

Vanni S, Campomanes P, Marcia M, Rothlisberger U. (2012)

Ion binding and internal hydration in the multidrug resistance secondary active transporter NorM investigated by molecular dynamics simulations

Biochemistry 51(6):1281-1287. doi: 10.1021/bi2015184
Europe PMC | doi


Hedderich T, Marcia M, Kopke J, Michel H. (2011)

PICKScreens, A New Database for the Comparison of Crystallization Screens for Biological Macromolecules

CRYST GROWTH DES 11(2):488-491. doi: 10.1021/cg101267n


Marcia M, Langer JD, Parcej D, Vogel V, Peng G, Michel H. (2010)

Characterizing a monotopic membrane enzyme. Biochemical, enzymatic and crystallization studies on Aquifex aeolicus sulfide:quinone oxidoreductase

Biochim. Biophys. Acta 1798(11):2114-2123. doi: 10.1016/j.bbamem.2010.07.033
Europe PMC | doi

Marcia M, Ermler U, Peng G, Michel H. (2010)

A new structure-based classification of sulfide:quinone oxidoreductases

Proteins 78(5):1073-1083. doi: 10.1002/prot.22665
Europe PMC | doi


Marcia M, Ermler U, Peng G, Michel H. (2009)

The structure of Aquifex aeolicus sulfide:quinone oxidoreductase, a basis to understand sulfide detoxification and respiration

Proc. Natl. Acad. Sci. U.S.A. 106(24):9625-9630. doi: 10.1073/pnas.0904165106
Europe PMC | doi